Mascot Search Results

User            : 
Email           : jpuddick@waikato.ac.nz
Search title    : 
Database        : NCBInr 20090718 (9308017 sequences; 3189511245 residues)
Taxonomy        : Bacteria (Eubacteria) (4990342 sequences)
Timestamp       : 23 Jul 2009 at 22:38:51 GMT
Top Score       : 152 for gi|1065148, Chain A, Barnase A43cS80C DISULFIDE MUTANT

Probability Based Mowse Score

Protein score is -10*Log(P), where P is the probability that the observed match is a random event.
Protein scores greater than 79 are significant (p<0.05).

Score Distribution

Concise Protein Summary Report

Help
  Significance threshold p< Max. number of hits

  

1.    gi|1065148    Mass: 12423    Score: 152    Expect: 3.1e-09  Queries matched: 12
 Chain A, Barnase A43cS80C DISULFIDE MUTANT
      gi|4139770    Mass: 12306    Score: 123    Expect: 2.5e-06  Queries matched: 10
 Chain A, Deletion Of A Buried Salt-Bridge In Barnase
      gi|230301    Mass: 12375    Score: 120    Expect: 5e-06  Queries matched: 10
 Chain A, Crystal Structure Of A Barnase-D(GpC) Complex At 1.9 Angstroms Resolution
      gi|493893    Mass: 12375    Score: 120    Expect: 5e-06  Queries matched: 10
 Chain L, Subsite Binding In An Rnase: Structure Of A Barnase- Tetranucleotide Complex At 1.76 Angstroms Resolution
      gi|442654    Mass: 12359    Score: 120    Expect: 5e-06  Queries matched: 10
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|493902    Mass: 12361    Score: 120    Expect: 5e-06  Queries matched: 10
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|1065209    Mass: 12333    Score: 120    Expect: 5e-06  Queries matched: 10
 Chain A, Barnase Mutant With Ile 76 Replaced By Ala
      gi|4139703    Mass: 12309    Score: 105    Expect: 0.00016  Queries matched: 9
 Chain A, Structural Response To Mutation At A Protein-Protein Interface
      gi|4139773    Mass: 12305    Score: 93     Expect: 0.0027  Queries matched: 8
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|1065155    Mass: 12357    Score: 90     Expect: 0.0047  Queries matched: 8
 Chain A, Barnase S85cH102C DISULFIDE MUTANT
      gi|493908    Mass: 12361    Score: 90     Expect: 0.0048  Queries matched: 8
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|1065216    Mass: 12333    Score: 90     Expect: 0.0048  Queries matched: 8
 Chain A, Barnase Mutant With Ile 88 Replaced By Ala
      gi|4139700    Mass: 12374    Score: 90     Expect: 0.0048  Queries matched: 8
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|493905    Mass: 12361    Score: 90     Expect: 0.0048  Queries matched: 8
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|442651    Mass: 12359    Score: 90     Expect: 0.0048  Queries matched: 8
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|1065224    Mass: 12333    Score: 90     Expect: 0.0048  Queries matched: 8
 Chain A, Barnase Mutant With Ile 96 Replaced By Ala
      gi|1065151    Mass: 12393    Score: 90     Expect: 0.0048  Queries matched: 8
 Chain A, Barnase T70cS92C DISULFIDE MUTANT
      gi|493911    Mass: 12361    Score: 90     Expect: 0.0048  Queries matched: 8
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|493899    Mass: 12361    Score: 90     Expect: 0.0051  Queries matched: 8
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|576011    Mass: 12345    Score: 87     Expect: 0.01  Queries matched: 8
 Chain A, Structural Studies Of Barnase Mutants
      gi|226887701    Mass: 12478    Score: 85     Expect: 0.015  Queries matched: 8
 Chain A, A Conformationally Strained, Circular Permutant Of Barnase
      gi|1065202    Mass: 12333    Score: 85     Expect: 0.016  Queries matched: 8
 Chain A, Barnase Mutant With Leu 14 Replaced By Ala
      gi|66360399    Mass: 12318    Score: 85     Expect: 0.016  Queries matched: 8
 Chain A, Water-Mediate Interaction At Aprotein-Protein Interface
      gi|253722854    Mass: 12415    Score: 85     Expect: 0.016  Queries matched: 8
 Chain A, Nmr Structure Of 15n-Labeled Barnase
      gi|576021    Mass: 12142    Score: 85     Expect: 0.016  Queries matched: 8
 Chain A, Crystallographic Analysis Of Phe->leu Substitution In The Hydrophobic Core Of Barnase
      gi|99032161    Mass: 12176    Score: 85     Expect: 0.016  Queries matched: 8
 Chain A, Barnase Cross-Linked With Glutaraldehyde
      gi|464661    Mass: 12374    Score: 82     Expect: 0.03  Queries matched: 8
 RecName: Full=Ribonuclease; AltName: Full=RNase Bci
      gi|188595921    Mass: 12318    Score: 78     Expect: 0.07  Queries matched: 7
 Chain A, Crystal Structural Analysis Of Barnase-Barstar Complex
      gi|4139683    Mass: 12318    Score: 75     Expect: 0.15  Queries matched: 7
 Chain A, Structural Response To Mutation At A Protein-Protein Interface
      gi|133149    Mass: 17462    Score: 74     Expect: 0.22  Queries matched: 8
 RecName: Full=Ribonuclease; AltName: Full=Barnase; AltName: Full=RNase Ba; Flags: Precursor
      gi|551694    Mass: 16588    Score: 74     Expect: 0.22  Queries matched: 8
 barnase (RNase) precursor [Bacillus amyloliquefaciens]
      gi|154687594    Mass: 16654    Score: 73     Expect: 0.26  Queries matched: 8
 ribonuclease precursor (Barnase) [Bacillus amyloliquefaciens FZB42]


2.    gi|452374    Mass: 12336    Score: 82     Expect: 0.03  Queries matched: 8
 ribonuclease [Bacillus circulans]

3.    gi|110834721    Mass: 40600    Score: 62     Expect: 2.9  Queries matched: 9
 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. [Alcanivorax borkumensis SK2]

4.    gi|124515244    Mass: 30199    Score: 58     Expect: 7.4  Queries matched: 8
 conserved protein of unknown function [Leptospirillum rubarum]

5.    gi|167562551    Mass: 22580    Score: 57     Expect: 10  Queries matched: 7
 hypothetical protein BoklE_08314 [Burkholderia oklahomensis EO147]

6.    gi|126652863    Mass: 21739    Score: 55     Expect: 14  Queries matched: 8
 ISSth1, transposase (orf1), IS3 family protein [Bacillus sp. B14905]

7.    gi|75674787    Mass: 97906    Score: 54     Expect: 19  Queries matched: 12
 AAA ATPase [Nitrobacter winogradskyi Nb-255]

8.    gi|148258968    Mass: 53294    Score: 54     Expect: 20  Queries matched: 9
 putative ABC-type sugar transport system, periplasmic component [Bradyrhizobium sp. BTAi1]

9.    gi|168333702    Mass: 13558    Score: 53     Expect: 25  Queries matched: 6
 hypothetical protein Epulo_02341 [Epulopiscium sp. 'N.t. morphotype B']

10.   gi|17548326    Mass: 84218    Score: 53     Expect: 26  Queries matched: 11
 hypothetical protein RS03018 [Ralstonia solanacearum GMI1000]

11.   gi|153833718    Mass: 38801    Score: 53     Expect: 26  Queries matched: 8
 succinylglutamate desuccinylase [Vibrio harveyi HY01]

12.   gi|149197993    Mass: 140495   Score: 53     Expect: 26  Queries matched: 14
 probable large, multifunctional secreted protein [Lentisphaera araneosa HTCC2155]

13.   gi|229133127    Mass: 24171    Score: 53     Expect: 26  Queries matched: 7
 GCN5-related N-acetyltransferase [Bacillus cereus BDRD-ST196]
      gi|229059961    Mass: 24172    Score: 53     Expect: 26  Queries matched: 7
 GCN5-related N-acetyltransferase [Bacillus cereus AH603]
      gi|229011565    Mass: 24170    Score: 52     Expect: 34  Queries matched: 7
 GCN5-related N-acetyltransferase [Bacillus mycoides DSM 2048]

14.   gi|126725676    Mass: 81723    Score: 52     Expect: 31  Queries matched: 11
 polyphosphate kinase [Rhodobacterales bacterium HTCC2150]

15.   gi|39938824    Mass: 15156    Score: 52     Expect: 31  Queries matched: 7
 hypothetical protein PAM338 [Onion yellows phytoplasma OY-M]

16.   gi|189345692    Mass: 16002    Score: 52     Expect: 33  Queries matched: 6
 thioesterase superfamily protein [Chlorobium limicola DSM 245]

17.   gi|170746634    Mass: 40997    Score: 51     Expect: 36  Queries matched: 8
 acyl-CoA dehydrogenase domain-containing protein [Methylobacterium radiotolerans JCM 2831]

Search Parameters

Type of search         : Peptide Mass Fingerprint
Enzyme                 : Trypsin
Mass values            : Monoisotopic
Protein Mass           : Unrestricted
Peptide Mass Tolerance : ± 200 ppm
Peptide Charge State   : 1+
Max Missed Cleavages   : 1
Number of queries      : 53

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