Mascot Search Results

User            : 
Email           : jpuddick@waikato.ac.nz
Search title    : 
Database        : NCBInr 20090725 (9330197 sequences; 3196564765 residues)
Taxonomy        : Bacteria (Eubacteria) (5010188 sequences)
Timestamp       : 30 Jul 2009 at 22:18:09 GMT
Top Score       : 115 for gi|442654, Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants

Probability Based Mowse Score

Protein score is -10*Log(P), where P is the probability that the observed match is a random event.
Protein scores greater than 80 are significant (p<0.05).

Score Distribution

Concise Protein Summary Report

Help
  Significance threshold p< Max. number of hits

  

1.    gi|442654    Mass: 12359    Score: 115    Expect: 1.6e-05  Queries matched: 8
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|4139770    Mass: 12306    Score: 96     Expect: 0.0011  Queries matched: 7
 Chain A, Deletion Of A Buried Salt-Bridge In Barnase
      gi|230301    Mass: 12375    Score: 94     Expect: 0.0019  Queries matched: 7
 Chain A, Crystal Structure Of A Barnase-D(GpC) Complex At 1.9 Angstroms Resolution
      gi|493893    Mass: 12375    Score: 94     Expect: 0.0019  Queries matched: 7
 Chain L, Subsite Binding In An Rnase: Structure Of A Barnase- Tetranucleotide Complex At 1.76 Angstroms Resolution
      gi|493902    Mass: 12361    Score: 94     Expect: 0.0019  Queries matched: 7
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|1065209    Mass: 12333    Score: 94     Expect: 0.0019  Queries matched: 7
 Chain A, Barnase Mutant With Ile 76 Replaced By Ala
      gi|1065148    Mass: 12423    Score: 94     Expect: 0.0019  Queries matched: 6
 Chain A, Barnase A43cS80C DISULFIDE MUTANT
      gi|4139773    Mass: 12305    Score: 77     Expect: 0.1  Queries matched: 6
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|576011    Mass: 12345    Score: 75     Expect: 0.15  Queries matched: 6
 Chain A, Structural Studies Of Barnase Mutants
      gi|4139703    Mass: 12309    Score: 75     Expect: 0.16  Queries matched: 6
 Chain A, Structural Response To Mutation At A Protein-Protein Interface
      gi|1065155    Mass: 12357    Score: 75     Expect: 0.16  Queries matched: 6
 Chain A, Barnase S85cH102C DISULFIDE MUTANT
      gi|493908    Mass: 12361    Score: 75     Expect: 0.16  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|1065216    Mass: 12333    Score: 75     Expect: 0.16  Queries matched: 6
 Chain A, Barnase Mutant With Ile 88 Replaced By Ala
      gi|4139700    Mass: 12374    Score: 75     Expect: 0.16  Queries matched: 6
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|493905    Mass: 12361    Score: 75     Expect: 0.16  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|442651    Mass: 12359    Score: 75     Expect: 0.16  Queries matched: 6
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|1065224    Mass: 12333    Score: 75     Expect: 0.16  Queries matched: 6
 Chain A, Barnase Mutant With Ile 96 Replaced By Ala
      gi|1065151    Mass: 12393    Score: 75     Expect: 0.16  Queries matched: 6
 Chain A, Barnase T70cS92C DISULFIDE MUTANT
      gi|493911    Mass: 12361    Score: 75     Expect: 0.16  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|493899    Mass: 12361    Score: 75     Expect: 0.17  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|226887701    Mass: 12478    Score: 73     Expect: 0.23  Queries matched: 6
 Chain A, A Conformationally Strained, Circular Permutant Of Barnase
      gi|1065202    Mass: 12333    Score: 73     Expect: 0.24  Queries matched: 6
 Chain A, Barnase Mutant With Leu 14 Replaced By Ala
      gi|66360399    Mass: 12318    Score: 73     Expect: 0.24  Queries matched: 6
 Chain A, Water-Mediate Interaction At Aprotein-Protein Interface
      gi|253722854    Mass: 12415    Score: 73     Expect: 0.24  Queries matched: 6
 Chain A, Nmr Structure Of 15n-Labeled Barnase
      gi|576021    Mass: 12142    Score: 73     Expect: 0.25  Queries matched: 6
 Chain A, Crystallographic Analysis Of Phe->leu Substitution In The Hydrophobic Core Of Barnase
      gi|99032161    Mass: 12176    Score: 73     Expect: 0.25  Queries matched: 6
 Chain A, Barnase Cross-Linked With Glutaraldehyde
      gi|464661    Mass: 12374    Score: 71     Expect: 0.37  Queries matched: 6
 RecName: Full=Ribonuclease; AltName: Full=RNase Bci
      gi|551694    Mass: 16588    Score: 66     Expect: 1.3  Queries matched: 6
 barnase (RNase) precursor [Bacillus amyloliquefaciens]
      gi|133149    Mass: 17462    Score: 66     Expect: 1.3  Queries matched: 6
 RecName: Full=Ribonuclease; AltName: Full=Barnase; AltName: Full=RNase Ba; Flags: Precursor
      gi|154687594    Mass: 16654    Score: 65     Expect: 1.5  Queries matched: 6
 ribonuclease precursor (Barnase) [Bacillus amyloliquefaciens FZB42]
      gi|188595921    Mass: 12318    Score: 58     Expect: 7.1  Queries matched: 5
 Chain A, Crystal Structural Analysis Of Barnase-Barstar Complex
      gi|4139683    Mass: 12318    Score: 58     Expect: 7.9  Queries matched: 5
 Chain A, Structural Response To Mutation At A Protein-Protein Interface


2.    gi|227871969    Mass: 17667    Score: 69     Expect: 0.59  Queries matched: 5
 possible dihydrofolate reductase [Oribacterium sinus F0268]

3.    gi|452374    Mass: 12336    Score: 54     Expect: 21  Queries matched: 6
 ribonuclease [Bacillus circulans]

4.    gi|191637874    Mass: 18761    Score: 53     Expect: 26  Queries matched: 6
 hypothetical protein LCABL_10970 [Lactobacillus casei BL23]

5.    gi|78355875    Mass: 96332    Score: 53     Expect: 27  Queries matched: 8
 TPR repeat-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20]

6.    gi|145955826    Mass: 41978    Score: 52     Expect: 32  Queries matched: 5
 hypothetical protein CdifQ_04001035 [Clostridium difficile QCD-32g58]

7.    gi|126347785    Mass: 12613    Score: 52     Expect: 35  Queries matched: 5
 putative IS1647 transposase [Streptomyces ambofaciens ATCC 23877]

8.    gi|167463102    Mass: 42880    Score: 51     Expect: 36  Queries matched: 6
 queuine tRNA-ribosyltransferase [Paenibacillus larvae subsp. larvae BRL-230010]

9.    gi|215430685    Mass: 63487    Score: 51     Expect: 37  Queries matched: 6
 hypothetical protein MtubE_08425 [Mycobacterium tuberculosis EAS054]

10.   gi|187250487    Mass: 15894    Score: 50     Expect: 52  Queries matched: 4
 hypothetical protein Emin_0065 [Elusimicrobium minutum Pei191]

11.   gi|83748057    Mass: 46245    Score: 50     Expect: 54  Queries matched: 6
 Acyl-CoA dehydrogenase [Ralstonia solanacearum UW551]

12.   gi|149373093    Mass: 89626    Score: 49     Expect: 58  Queries matched: 6
 hypothetical protein SCB49_11347 [unidentified eubacterium SCB49]

13.   gi|90962227    Mass: 51103    Score: 49     Expect: 65  Queries matched: 5
 aminopeptidase C [Lactobacillus salivarius UCC118]
      gi|227891233    Mass: 51044    Score: 49     Expect: 65  Queries matched: 5
 bleomycin hydrolase [Lactobacillus salivarius ATCC 11741]

14.   gi|167754080    Mass: 96940    Score: 49     Expect: 69  Queries matched: 9
 hypothetical protein ALIPUT_02368 [Alistipes putredinis DSM 17216]

15.   gi|154504784    Mass: 24977    Score: 48     Expect: 76  Queries matched: 6
 hypothetical protein RUMGNA_02293 [Ruminococcus gnavus ATCC 29149]

16.   gi|126648490    Mass: 17479    Score: 48     Expect: 79  Queries matched: 6
 putative RNA polymerase ECF-type sigma factor [Algoriphagus sp. PR1]

17.   gi|206562529    Mass: 49822    Score: 47     Expect: 93  Queries matched: 7
 putative oxidoreductase [Burkholderia cenocepacia J2315]

18.   gi|187928468    Mass: 51424    Score: 47     Expect: 1e+02  Queries matched: 5
 3-isopropylmalate dehydratase, large subunit [Ralstonia pickettii 12J]

Search Parameters

Type of search         : Peptide Mass Fingerprint
Enzyme                 : Trypsin
Mass values            : Monoisotopic
Protein Mass           : Unrestricted
Peptide Mass Tolerance : ± 200 ppm
Peptide Charge State   : 1+
Max Missed Cleavages   : 1
Number of queries      : 48
Selected for scoring   : 15

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