Mascot Search Results

User            : 
Email           : jpuddick@waikato.ac.nz
Search title    : 
Database        : NCBInr 20090704 (9251875 sequences; 3169794832 residues)
Taxonomy        : Bacteria (Eubacteria) (4922962 sequences)
Timestamp       : 10 Jul 2009 at 01:42:09 GMT
Top Score       : 143 for gi|493908, Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase

Probability Based Mowse Score

Protein score is -10*Log(P), where P is the probability that the observed match is a random event.
Protein scores greater than 79 are significant (p<0.05).

Score Distribution

Concise Protein Summary Report

Help
  Significance threshold p< Max. number of hits

  

1.    gi|493908    Mass: 12361    Score: 143    Expect: 2.5e-08  Queries matched: 9
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|493905    Mass: 12361    Score: 143    Expect: 2.5e-08  Queries matched: 9
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|493911    Mass: 12361    Score: 143    Expect: 2.5e-08  Queries matched: 9
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|4139773    Mass: 12305    Score: 123    Expect: 2.5e-06  Queries matched: 7
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|4139770    Mass: 12306    Score: 123    Expect: 2.5e-06  Queries matched: 7
 Chain A, Deletion Of A Buried Salt-Bridge In Barnase
      gi|230301    Mass: 12375    Score: 121    Expect: 3.9e-06  Queries matched: 7
 Chain A, Crystal Structure Of A Barnase-D(GpC) Complex At 1.9 Angstroms Resolution
      gi|493893    Mass: 12375    Score: 121    Expect: 3.9e-06  Queries matched: 7
 Chain L, Subsite Binding In An Rnase: Structure Of A Barnase- Tetranucleotide Complex At 1.76 Angstroms Resolution
      gi|1065216    Mass: 12333    Score: 121    Expect: 3.9e-06  Queries matched: 7
 Chain A, Barnase Mutant With Ile 88 Replaced By Ala
      gi|4139700    Mass: 12374    Score: 121    Expect: 3.9e-06  Queries matched: 7
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|442651    Mass: 12359    Score: 121    Expect: 3.9e-06  Queries matched: 7
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|1065224    Mass: 12333    Score: 121    Expect: 3.9e-06  Queries matched: 7
 Chain A, Barnase Mutant With Ile 96 Replaced By Ala
      gi|1065151    Mass: 12393    Score: 121    Expect: 3.9e-06  Queries matched: 7
 Chain A, Barnase T70cS92C DISULFIDE MUTANT
      gi|157830405    Mass: 12330    Score: 121    Expect: 3.9e-06  Queries matched: 7
 Chain A, Barnase
      gi|188595921    Mass: 12318    Score: 102    Expect: 0.00031  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Barnase-Barstar Complex
      gi|4139703    Mass: 12309    Score: 101    Expect: 0.00039  Queries matched: 6
 Chain A, Structural Response To Mutation At A Protein-Protein Interface
      gi|1065155    Mass: 12357    Score: 101    Expect: 0.00039  Queries matched: 6
 Chain A, Barnase S85cH102C DISULFIDE MUTANT
      gi|442654    Mass: 12359    Score: 100    Expect: 0.00049  Queries matched: 6
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|493902    Mass: 12361    Score: 100    Expect: 0.00049  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|1065209    Mass: 12333    Score: 100    Expect: 0.00049  Queries matched: 6
 Chain A, Barnase Mutant With Ile 76 Replaced By Ala
      gi|1065148    Mass: 12423    Score: 100    Expect: 0.00049  Queries matched: 6
 Chain A, Barnase A43cS80C DISULFIDE MUTANT
      gi|493899    Mass: 12361    Score: 100    Expect: 0.00049  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|576011    Mass: 12345    Score: 77     Expect: 0.096  Queries matched: 5
 Chain A, Structural Studies Of Barnase Mutants
      gi|226887701    Mass: 12478    Score: 75     Expect: 0.15  Queries matched: 5
 Chain A, A Conformationally Strained, Circular Permutant Of Barnase
      gi|1065202    Mass: 12333    Score: 75     Expect: 0.15  Queries matched: 5
 Chain A, Barnase Mutant With Leu 14 Replaced By Ala
      gi|66360399    Mass: 12318    Score: 75     Expect: 0.15  Queries matched: 5
 Chain A, Water-Mediate Interaction At Aprotein-Protein Interface
      gi|157876435    Mass: 12370    Score: 75     Expect: 0.15  Queries matched: 5
 Chain A, Nmr Structure Of 15n-Labeled Barnase
      gi|576021    Mass: 12142    Score: 75     Expect: 0.16  Queries matched: 5
 Chain A, Crystallographic Analysis Of Phe->leu Substitution In The Hydrophobic Core Of Barnase
      gi|99032161    Mass: 12176    Score: 75     Expect: 0.16  Queries matched: 5
 Chain A, Barnase Cross-Linked With Glutaraldehyde
      gi|464661    Mass: 12374    Score: 73     Expect: 0.24  Queries matched: 5
 RecName: Full=Ribonuclease; AltName: Full=RNase Bci
      gi|133149    Mass: 17462    Score: 68     Expect: 0.84  Queries matched: 5
 RecName: Full=Ribonuclease; AltName: Full=Barnase; AltName: Full=RNase Ba; Flags: Precursor
      gi|551694    Mass: 16588    Score: 68     Expect: 0.88  Queries matched: 5
 barnase (RNase) precursor [Bacillus amyloliquefaciens]
      gi|154687594    Mass: 16654    Score: 67     Expect: 0.92  Queries matched: 5
 ribonuclease precursor (Barnase) [Bacillus amyloliquefaciens FZB42]
      gi|4139683    Mass: 12318    Score: 60     Expect: 5.5  Queries matched: 4
 Chain A, Structural Response To Mutation At A Protein-Protein Interface
      gi|121594314    Mass: 25554    Score: 51     Expect: 36  Queries matched: 4
 PAP2 (acid phosphatase) superfamily protein-like protein [Acidovorax sp. JS42]


2.    gi|167461702    Mass: 46307    Score: 65     Expect: 1.7  Queries matched: 6
 cytochrome P450 [Paenibacillus larvae subsp. larvae BRL-230010]

3.    gi|239624765    Mass: 29985    Score: 62     Expect: 3.1  Queries matched: 5
 transcriptional regulator [Clostridiales bacterium 1_7_47_FAA]

4.    gi|126739724    Mass: 30552    Score: 61     Expect: 3.9  Queries matched: 5
 signal peptidase I [Roseobacter sp. SK209-2-6]

5.    gi|238796095    Mass: 32442    Score: 60     Expect: 4.8  Queries matched: 5
 hypothetical protein ymoll0001_4310 [Yersinia mollaretii ATCC 43969]
      gi|126731831    Mass: 15533    Score: 54     Expect: 18  Queries matched: 4
 putative translation initiation inhibitor [Sagittula stellata E-37]

6.    gi|170737530    Mass: 8007     Score: 58     Expect: 7  Queries matched: 4
 hypothetical protein Bcenmc03_5171 [Burkholderia cenocepacia MC0-3]

7.    gi|54297205    Mass: 19157    Score: 55     Expect: 17  Queries matched: 4
 crossover junction endodeoxyribonuclease ruvC [Legionella pneumophila str. Paris]

8.    gi|223480442    Mass: 40644    Score: 54     Expect: 20  Queries matched: 5
 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Alcanivorax sp. DG881]

9.    gi|149908631    Mass: 48275    Score: 53     Expect: 26  Queries matched: 5
 Putative sensor protein CpxA [Moritella sp. PE36]

10.   gi|163849705    Mass: 45667    Score: 53     Expect: 26  Queries matched: 6
 integrase family protein [Methylobacterium extorquens PA1]

11.   gi|189347724    Mass: 33185    Score: 52     Expect: 33  Queries matched: 6
 Lytic transglycosylase catalytic [Chlorobium limicola DSM 245]

12.   gi|134096618    Mass: 15471    Score: 52     Expect: 34  Queries matched: 6
 putative RNase P, protein C5 component, processes tRNA, 4.5S RNA (partial) [Herminiimonas arsenicoxydans]

13.   gi|119356662    Mass: 19763    Score: 51     Expect: 36  Queries matched: 4
 AsnC family transcriptional regulator [Chlorobium phaeobacteroides DSM 266]

14.   gi|238757144    Mass: 21557    Score: 51     Expect: 36  Queries matched: 5
 Precorrin-6Y C5,15-methyltransferase [decarboxylating] [Yersinia aldovae ATCC 35236]

15.   gi|226311386    Mass: 52022    Score: 51     Expect: 38  Queries matched: 5
 hypothetical protein BBR47_17990 [Brevibacillus brevis NBRC 100599]

16.   gi|16224016    Mass: 23875    Score: 51     Expect: 40  Queries matched: 5
 Sim19 [Streptomyces antibioticus]

Search Parameters

Type of search         : Peptide Mass Fingerprint
Enzyme                 : Trypsin
Mass values            : Monoisotopic
Protein Mass           : Unrestricted
Peptide Mass Tolerance : ± 200 ppm
Peptide Charge State   : 1+
Max Missed Cleavages   : 1
Number of queries      : 24
Selected for scoring   : 14

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