Mascot Search Results

User            : 
Email           : jpuddick@waikato.ac.nz
Search title    : 
Database        : NCBInr 20090718 (9308017 sequences; 3189511245 residues)
Taxonomy        : Bacteria (Eubacteria) (4990342 sequences)
Timestamp       : 23 Jul 2009 at 22:32:29 GMT
Top Score       : 93 for gi|4139770, Chain A, Deletion Of A Buried Salt-Bridge In Barnase

Probability Based Mowse Score

Protein score is -10*Log(P), where P is the probability that the observed match is a random event.
Protein scores greater than 79 are significant (p<0.05).

Score Distribution

Concise Protein Summary Report

Help
  Significance threshold p< Max. number of hits

  

1.    gi|4139770    Mass: 12306    Score: 93     Expect: 0.0026  Queries matched: 7
 Chain A, Deletion Of A Buried Salt-Bridge In Barnase
      gi|226887701    Mass: 12478    Score: 90     Expect: 0.0052  Queries matched: 7
 Chain A, A Conformationally Strained, Circular Permutant Of Barnase
      gi|230301    Mass: 12375    Score: 90     Expect: 0.0053  Queries matched: 7
 Chain A, Crystal Structure Of A Barnase-D(GpC) Complex At 1.9 Angstroms Resolution
      gi|1065202    Mass: 12333    Score: 90     Expect: 0.0053  Queries matched: 7
 Chain A, Barnase Mutant With Leu 14 Replaced By Ala
      gi|493893    Mass: 12375    Score: 90     Expect: 0.0053  Queries matched: 7
 Chain L, Subsite Binding In An Rnase: Structure Of A Barnase- Tetranucleotide Complex At 1.76 Angstroms Resolution
      gi|66360399    Mass: 12318    Score: 90     Expect: 0.0053  Queries matched: 7
 Chain A, Water-Mediate Interaction At Aprotein-Protein Interface
      gi|253722854    Mass: 12415    Score: 90     Expect: 0.0053  Queries matched: 7
 Chain A, Nmr Structure Of 15n-Labeled Barnase
      gi|576021    Mass: 12142    Score: 90     Expect: 0.0056  Queries matched: 7
 Chain A, Crystallographic Analysis Of Phe->leu Substitution In The Hydrophobic Core Of Barnase
      gi|99032161    Mass: 12176    Score: 90     Expect: 0.0056  Queries matched: 7
 Chain A, Barnase Cross-Linked With Glutaraldehyde
      gi|464661    Mass: 12374    Score: 87     Expect: 0.01  Queries matched: 7
 RecName: Full=Ribonuclease; AltName: Full=RNase Bci
      gi|133149    Mass: 17462    Score: 79     Expect: 0.059  Queries matched: 7
 RecName: Full=Ribonuclease; AltName: Full=Barnase; AltName: Full=RNase Ba; Flags: Precursor
      gi|551694    Mass: 16588    Score: 79     Expect: 0.06  Queries matched: 7
 barnase (RNase) precursor [Bacillus amyloliquefaciens]
      gi|154687594    Mass: 16654    Score: 79     Expect: 0.067  Queries matched: 7
 ribonuclease precursor (Barnase) [Bacillus amyloliquefaciens FZB42]
      gi|4139773    Mass: 12305    Score: 76     Expect: 0.12  Queries matched: 6
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|576011    Mass: 12345    Score: 74     Expect: 0.21  Queries matched: 6
 Chain A, Structural Studies Of Barnase Mutants
      gi|4139703    Mass: 12309    Score: 74     Expect: 0.22  Queries matched: 6
 Chain A, Structural Response To Mutation At A Protein-Protein Interface
      gi|1065155    Mass: 12357    Score: 74     Expect: 0.22  Queries matched: 6
 Chain A, Barnase S85cH102C DISULFIDE MUTANT
      gi|493908    Mass: 12361    Score: 74     Expect: 0.22  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|1065216    Mass: 12333    Score: 74     Expect: 0.22  Queries matched: 6
 Chain A, Barnase Mutant With Ile 88 Replaced By Ala
      gi|4139700    Mass: 12374    Score: 74     Expect: 0.22  Queries matched: 6
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|493905    Mass: 12361    Score: 74     Expect: 0.22  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|442651    Mass: 12359    Score: 74     Expect: 0.22  Queries matched: 6
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|1065224    Mass: 12333    Score: 74     Expect: 0.22  Queries matched: 6
 Chain A, Barnase Mutant With Ile 96 Replaced By Ala
      gi|1065151    Mass: 12393    Score: 74     Expect: 0.22  Queries matched: 6
 Chain A, Barnase T70cS92C DISULFIDE MUTANT
      gi|493911    Mass: 12361    Score: 74     Expect: 0.22  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|442654    Mass: 12359    Score: 73     Expect: 0.23  Queries matched: 6
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|493902    Mass: 12361    Score: 73     Expect: 0.23  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|1065209    Mass: 12333    Score: 73     Expect: 0.23  Queries matched: 6
 Chain A, Barnase Mutant With Ile 76 Replaced By Ala
      gi|493899    Mass: 12361    Score: 73     Expect: 0.24  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|188595921    Mass: 12318    Score: 60     Expect: 4.6  Queries matched: 5
 Chain A, Crystal Structural Analysis Of Barnase-Barstar Complex
      gi|4139683    Mass: 12318    Score: 60     Expect: 5.2  Queries matched: 5
 Chain A, Structural Response To Mutation At A Protein-Protein Interface
      gi|452374    Mass: 12336    Score: 56     Expect: 13  Queries matched: 5
 ribonuclease [Bacillus circulans]


2.    gi|1065148    Mass: 12423    Score: 57     Expect: 9.1  Queries matched: 6
 Chain A, Barnase A43cS80C DISULFIDE MUTANT

3.    gi|146312857    Mass: 38624    Score: 49     Expect: 57  Queries matched: 5
 tRNA pseudouridine synthase D [Enterobacter sp. 638]

4.    gi|210635258    Mass: 7469     Score: 47     Expect: 1e+02  Queries matched: 3
 hypothetical protein COLSTE_02401 [Collinsella stercoris DSM 13279]

5.    gi|218898533    Mass: 18207    Score: 46     Expect: 1.1e+02  Queries matched: 4
 hypothetical protein BCG9842_B1768 [Bacillus cereus G9842]

6.    gi|219871806    Mass: 31510    Score: 46     Expect: 1.4e+02  Queries matched: 4
 endonuclease IV [Haemophilus parasuis SH0165]

7.    gi|21243880    Mass: 64991    Score: 46     Expect: 1.4e+02  Queries matched: 5
 aspartyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306]

8.    gi|42521891    Mass: 52854    Score: 45     Expect: 1.5e+02  Queries matched: 5
 hypothetical protein Bd0267 [Bdellovibrio bacteriovorus HD100]

9.    gi|90655387    Mass: 10094    Score: 45     Expect: 1.7e+02  Queries matched: 3
 unknown [uncultured marine type-A Synechococcus GOM 3M9]

10.   gi|223467913    Mass: 28461    Score: 44     Expect: 1.9e+02  Queries matched: 4
 hypothetical protein BIFBRE_01649 [Bifidobacterium breve DSM 20213]

11.   gi|253700674    Mass: 7769     Score: 44     Expect: 1.9e+02  Queries matched: 3
 hypothetical protein GM21_2053 [Geobacter sp. M21]

12.   gi|194367162    Mass: 33100    Score: 44     Expect: 2.1e+02  Queries matched: 4
 transcriptional regulator, LysR family [Stenotrophomonas maltophilia R551-3]

13.   gi|225122409    Mass: 13801    Score: 44     Expect: 2.2e+02  Queries matched: 3
 type I secretion target repeat protein [Rhodobacterales bacterium HTCC2083]

14.   gi|21220017    Mass: 17759    Score: 43     Expect: 2.4e+02  Queries matched: 4
 secreted protein [Streptomyces coelicolor A3(2)]

15.   gi|226867983    Mass: 12525    Score: 43     Expect: 2.6e+02  Queries matched: 3
 hypothetical protein AmirDRAFT_32790 [Actinosynnema mirum DSM 43827]

16.   gi|212710599    Mass: 31744    Score: 43     Expect: 2.7e+02  Queries matched: 4
 hypothetical protein PROVALCAL_01665 [Providencia alcalifaciens DSM 30120]

17.   gi|228002499    Mass: 21986    Score: 43     Expect: 2.7e+02  Queries matched: 4
 conserved hypothetical protein TIGR00488 [Anaerococcus prevotii DSM 20548]

18.   gi|162454662    Mass: 42000    Score: 42     Expect: 2.8e+02  Queries matched: 5
 LysR family transcriptional regulator [Sorangium cellulosum 'So ce 56']

19.   gi|229537266    Mass: 32553    Score: 42     Expect: 2.9e+02  Queries matched: 4
 biopolymer transport protein [Planctomyces limnophilus DSM 3776]

Search Parameters

Type of search         : Peptide Mass Fingerprint
Enzyme                 : Trypsin
Mass values            : Monoisotopic
Protein Mass           : Unrestricted
Peptide Mass Tolerance : ± 200 ppm
Peptide Charge State   : 1+
Max Missed Cleavages   : 1
Number of queries      : 45
Selected for scoring   : 29

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