Mascot Search Results

User            : 
Email           : jpuddick@waikato.ac.nz
Search title    : 
Database        : NCBInr 20090131 (7783044 sequences; 2684004132 residues)
Timestamp       : 3 Feb 2009 at 21:19:11 GMT
Top Score       : 110 for gi|4139770, Chain A, Deletion Of A Buried Salt-Bridge In Barnase

Probability Based Mowse Score

Protein score is -10*Log(P), where P is the probability that the observed match is a random event.
Protein scores greater than 81 are significant (p<0.05).

Score Distribution

Concise Protein Summary Report

Help
  Significance threshold p< Max. number of hits

  

1.    gi|4139770    Mass: 12306    Score: 110    Expect: 7.8e-05  Queries matched: 8
 Chain A, Deletion Of A Buried Salt-Bridge In Barnase
      gi|230301    Mass: 12375    Score: 108    Expect: 0.00012  Queries matched: 8
 Chain A, Crystal Structure Of A Barnase-D(GpC) Complex At 1.9 Angstroms Resolution
      gi|493893    Mass: 12375    Score: 108    Expect: 0.00012  Queries matched: 8
 Chain L, Subsite Binding In An Rnase: Structure Of A Barnase- Tetranucleotide Complex At 1.76 Angstroms Resolution
      gi|157830405    Mass: 12330    Score: 108    Expect: 0.00012  Queries matched: 8
 Chain A, Barnase
      gi|1439559    Mass: 12506    Score: 108    Expect: 0.00012  Queries matched: 8
 barnase
      gi|56406595    Mass: 12537    Score: 108    Expect: 0.00012  Queries matched: 8
 barnase [Flexi Vector pF1A T7]
      gi|4139703    Mass: 12309    Score: 108    Expect: 0.00012  Queries matched: 7
 Chain A, Structural Response To Mutation At A Protein-Protein Interface
      gi|1065155    Mass: 12357    Score: 108    Expect: 0.00012  Queries matched: 7
 Chain A, Barnase S85cH102C DISULFIDE MUTANT
      gi|4139773    Mass: 12305    Score: 91     Expect: 0.0058  Queries matched: 7
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|188595921    Mass: 12318    Score: 91     Expect: 0.0058  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Barnase-Barstar Complex
      gi|493908    Mass: 12361    Score: 90     Expect: 0.0083  Queries matched: 7
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|1065216    Mass: 12333    Score: 90     Expect: 0.0083  Queries matched: 7
 Chain A, Barnase Mutant With Ile 88 Replaced By Ala
      gi|4139700    Mass: 12374    Score: 90     Expect: 0.0083  Queries matched: 7
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|493905    Mass: 12361    Score: 90     Expect: 0.0083  Queries matched: 7
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|442651    Mass: 12359    Score: 90     Expect: 0.0083  Queries matched: 7
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|1065224    Mass: 12333    Score: 90     Expect: 0.0083  Queries matched: 7
 Chain A, Barnase Mutant With Ile 96 Replaced By Ala
      gi|1065151    Mass: 12393    Score: 90     Expect: 0.0083  Queries matched: 7
 Chain A, Barnase T70cS92C DISULFIDE MUTANT
      gi|493911    Mass: 12361    Score: 90     Expect: 0.0083  Queries matched: 7
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|442654    Mass: 12359    Score: 90     Expect: 0.0087  Queries matched: 7
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|493902    Mass: 12361    Score: 90     Expect: 0.0087  Queries matched: 7
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|1065209    Mass: 12333    Score: 90     Expect: 0.0087  Queries matched: 7
 Chain A, Barnase Mutant With Ile 76 Replaced By Ala
      gi|493899    Mass: 12361    Score: 90     Expect: 0.0087  Queries matched: 7
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|576011    Mass: 12345    Score: 68     Expect: 1.1  Queries matched: 6
 Chain A, Structural Studies Of Barnase Mutants
      gi|1065202    Mass: 12333    Score: 66     Expect: 1.7  Queries matched: 6
 Chain A, Barnase Mutant With Leu 14 Replaced By Ala
      gi|66360399    Mass: 12318    Score: 66     Expect: 1.7  Queries matched: 6
 Chain A, Water-Mediate Interaction At Aprotein-Protein Interface
      gi|157876435    Mass: 12370    Score: 66     Expect: 1.7  Queries matched: 6
 Chain A, Nmr Structure Of 15n-Labeled Barnase
      gi|576021    Mass: 12142    Score: 66     Expect: 1.8  Queries matched: 6
 Chain A, Crystallographic Analysis Of Phe->leu Substitution In The Hydrophobic Core Of Barnase
      gi|99032161    Mass: 12176    Score: 66     Expect: 1.8  Queries matched: 6
 Chain A, Barnase Cross-Linked With Glutaraldehyde
      gi|30984052    Mass: 14613    Score: 65     Expect: 2.4  Queries matched: 6
 barnase ribonuclease precursor [Cloning vector pHRBar-6]
      gi|464661    Mass: 12374    Score: 65     Expect: 2.7  Queries matched: 6
 RecName: Full=Ribonuclease; AltName: Full=RNase Bci
      gi|133149    Mass: 17462    Score: 59     Expect: 9.6  Queries matched: 6
 RecName: Full=Ribonuclease; AltName: Full=Barnase; AltName: Full=RNase Ba; Flags: Precursor
      gi|551694    Mass: 16588    Score: 59     Expect: 9.8  Queries matched: 6
 barnase (RNase) precursor
      gi|154687594    Mass: 16654    Score: 59     Expect: 10  Queries matched: 6
 ribonuclease precursor (Barnase) [Bacillus amyloliquefaciens FZB42]
      gi|112146878    Mass: 21873    Score: 58     Expect: 12  Queries matched: 6
 LacZ/MRS/barnase fusion protein [PCR cloning vector pAnti-Kit-Barnase]
      gi|83754638    Mass: 15698    Score: 56     Expect: 21  Queries matched: 5
 Chain A, Inhibitor Cystine Knot Protein Mcoeeti Fused To The Catalytically Inactive Barnase Mutant H102a
      gi|4139683    Mass: 12318    Score: 53     Expect: 40  Queries matched: 5
 Chain A, Structural Response To Mutation At A Protein-Protein Interface
      gi|22536744    Mass: 15617    Score: 50     Expect: 69  Queries matched: 4
 prophage LambdaSa1, single-strand binding protein [Streptococcus agalactiae 2603V/R]
      gi|42741003    Mass: 12545    Score: 50     Expect: 80  Queries matched: 5
 barnase [Gene trapping vector pEU334AN]
      gi|38637616    Mass: 9363     Score: 49     Expect: 89  Queries matched: 4
 hypothetical protein [Oryza sativa Japonica Group]
      gi|452374    Mass: 12336    Score: 48     Expect: 1.1e+02  Queries matched: 4
 ribonuclease [Bacillus circulans]
      gi|169620475    Mass: 23555    Score: 48     Expect: 1.4e+02  Queries matched: 4
 hypothetical protein SNOG_13437 [Phaeosphaeria nodorum SN15]


2.    gi|1065148    Mass: 12423    Score: 90     Expect: 0.0087  Queries matched: 8
 Chain A, Barnase A43cS80C DISULFIDE MUTANT

3.    gi|152975584    Mass: 56881    Score: 51     Expect: 59  Queries matched: 6
 propionyl-CoA carboxylase [Bacillus cereus subsp. cytotoxis NVH 391-98]

4.    gi|16082861    Mass: 12429    Score: 50     Expect: 71  Queries matched: 4
 hypothetical protein YPMT1.69 [Yersinia pestis CO92]

5.    gi|218715751    Mass: 15272    Score: 49     Expect: 1e+02  Queries matched: 6
 FKBP-type peptidyl-prolyl isomerase, putative [Talaromyces stipitatus ATCC 10500]

6.    gi|195955369    Mass: 44190    Score: 48     Expect: 1.2e+02  Queries matched: 7
 N-acetylglucosamine-6-phosphate deacetylase (nagA) [Borrelia burgdorferi CA-11.2a]

7.    gi|191637874    Mass: 18761    Score: 48     Expect: 1.3e+02  Queries matched: 4
 Putative uncharacterized protein [Lactobacillus casei BL23]

8.    gi|162447042    Mass: 155524   Score: 48     Expect: 1.4e+02  Queries matched: 10
 DNA-directed RNA polymerase, subunit beta-prime [Acholeplasma laidlawii PG-8A]

9.    gi|56783104    Mass: 18245    Score: 47     Expect: 1.4e+02  Queries matched: 4
 envelope glycoprotein [Human immunodeficiency virus 1]

10.   gi|218724530    Mass: 74743    Score: 47     Expect: 1.4e+02  Queries matched: 6
 ATP dependent RNA helicase, putative [Talaromyces stipitatus ATCC 10500]

Search Parameters

Type of search         : Peptide Mass Fingerprint
Enzyme                 : Trypsin
Mass values            : Monoisotopic
Protein Mass           : Unrestricted
Peptide Mass Tolerance : ± 200 ppm
Peptide Charge State   : 1+
Max Missed Cleavages   : 1
Number of queries      : 44
Selected for scoring   : 20

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