Mascot Search Results

User            : 
Email           : jpuddick@waikato.ac.nz
Search title    : 
Database        : NCBInr 20090718 (9308017 sequences; 3189511245 residues)
Taxonomy        : Bacteria (Eubacteria) (4990342 sequences)
Timestamp       : 20 Jul 2009 at 03:37:59 GMT
Top Score       : 67 for gi|493908, Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase

Probability Based Mowse Score

Protein score is -10*Log(P), where P is the probability that the observed match is a random event.
Protein scores greater than 79 are significant (p<0.05).

Score Distribution

Concise Protein Summary Report

Help
  Significance threshold p< Max. number of hits

  

1.    gi|493908    Mass: 12361    Score: 67     Expect: 1.1  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|493905    Mass: 12361    Score: 67     Expect: 1.1  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|493911    Mass: 12361    Score: 67     Expect: 1.1  Queries matched: 6
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|4139773    Mass: 12305    Score: 52     Expect: 31  Queries matched: 5
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|4139770    Mass: 12306    Score: 52     Expect: 31  Queries matched: 5
 Chain A, Deletion Of A Buried Salt-Bridge In Barnase
      gi|226887701    Mass: 12478    Score: 50     Expect: 46  Queries matched: 5
 Chain A, A Conformationally Strained, Circular Permutant Of Barnase
      gi|230301    Mass: 12375    Score: 50     Expect: 46  Queries matched: 5
 Chain A, Crystal Structure Of A Barnase-D(GpC) Complex At 1.9 Angstroms Resolution
      gi|1065202    Mass: 12333    Score: 50     Expect: 46  Queries matched: 5
 Chain A, Barnase Mutant With Leu 14 Replaced By Ala
      gi|493893    Mass: 12375    Score: 50     Expect: 46  Queries matched: 5
 Chain L, Subsite Binding In An Rnase: Structure Of A Barnase- Tetranucleotide Complex At 1.76 Angstroms Resolution
      gi|1065216    Mass: 12333    Score: 50     Expect: 46  Queries matched: 5
 Chain A, Barnase Mutant With Ile 88 Replaced By Ala
      gi|4139700    Mass: 12374    Score: 50     Expect: 46  Queries matched: 5
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|442651    Mass: 12359    Score: 50     Expect: 46  Queries matched: 5
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|576011    Mass: 12345    Score: 50     Expect: 46  Queries matched: 4
 Chain A, Structural Studies Of Barnase Mutants
      gi|1065224    Mass: 12333    Score: 50     Expect: 46  Queries matched: 5
 Chain A, Barnase Mutant With Ile 96 Replaced By Ala
      gi|1065151    Mass: 12393    Score: 50     Expect: 46  Queries matched: 5
 Chain A, Barnase T70cS92C DISULFIDE MUTANT
      gi|66360399    Mass: 12318    Score: 50     Expect: 46  Queries matched: 5
 Chain A, Water-Mediate Interaction At Aprotein-Protein Interface
      gi|253722854    Mass: 12415    Score: 50     Expect: 46  Queries matched: 5
 Chain A, Nmr Structure Of 15n-Labeled Barnase
      gi|576021    Mass: 12142    Score: 50     Expect: 47  Queries matched: 5
 Chain A, Crystallographic Analysis Of Phe->leu Substitution In The Hydrophobic Core Of Barnase
      gi|99032161    Mass: 12176    Score: 50     Expect: 47  Queries matched: 5
 Chain A, Barnase Cross-Linked With Glutaraldehyde
      gi|464661    Mass: 12374    Score: 49     Expect: 64  Queries matched: 5
 RecName: Full=Ribonuclease; AltName: Full=RNase Bci
      gi|551694    Mass: 16588    Score: 44     Expect: 1.8e+02  Queries matched: 5
 barnase (RNase) precursor [Bacillus amyloliquefaciens]
      gi|133149    Mass: 17462    Score: 44     Expect: 1.8e+02  Queries matched: 5
 RecName: Full=Ribonuclease; AltName: Full=Barnase; AltName: Full=RNase Ba; Flags: Precursor
      gi|154687594    Mass: 16654    Score: 44     Expect: 1.9e+02  Queries matched: 5
 ribonuclease precursor (Barnase) [Bacillus amyloliquefaciens FZB42]
      gi|85709552    Mass: 8439     Score: 39     Expect: 6.6e+02  Queries matched: 3
 transcriptional regulator, Cro/CI family protein [Erythrobacter sp. NAP1]
      gi|188595921    Mass: 12318    Score: 36     Expect: 1.1e+03  Queries matched: 4
 Chain A, Crystal Structural Analysis Of Barnase-Barstar Complex
      gi|4139683    Mass: 12318    Score: 36     Expect: 1.3e+03  Queries matched: 3
 Chain A, Structural Response To Mutation At A Protein-Protein Interface
      gi|4139703    Mass: 12309    Score: 35     Expect: 1.5e+03  Queries matched: 4
 Chain A, Structural Response To Mutation At A Protein-Protein Interface
      gi|1065155    Mass: 12357    Score: 35     Expect: 1.5e+03  Queries matched: 4
 Chain A, Barnase S85cH102C DISULFIDE MUTANT
      gi|442654    Mass: 12359    Score: 35     Expect: 1.6e+03  Queries matched: 4
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|493902    Mass: 12361    Score: 35     Expect: 1.6e+03  Queries matched: 4
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|1065209    Mass: 12333    Score: 35     Expect: 1.6e+03  Queries matched: 4
 Chain A, Barnase Mutant With Ile 76 Replaced By Ala
      gi|1065148    Mass: 12423    Score: 35     Expect: 1.6e+03  Queries matched: 4
 Chain A, Barnase A43cS80C DISULFIDE MUTANT
      gi|493899    Mass: 12361    Score: 35     Expect: 1.6e+03  Queries matched: 4
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|196156594    Mass: 15299    Score: 34     Expect: 1.9e+03  Queries matched: 3
 hypothetical protein MADE_01785 [Alteromonas macleodii 'Deep ecotype']
      gi|206968491    Mass: 12606    Score: 33     Expect: 2.6e+03  Queries matched: 3
 conserved hypothetical protein [Bacillus cereus AH1134]


2.    gi|111017348    Mass: 17621    Score: 44     Expect: 2.2e+02  Queries matched: 5
 hypothetical protein RHA1_ro00326 [Rhodococcus jostii RHA1]
      gi|90022432    Mass: 12253    Score: 33     Expect: 2.7e+03  Queries matched: 3
 hypothetical protein Sde_2790 [Saccharophagus degradans 2-40]

3.    gi|146311845    Mass: 6734     Score: 40     Expect: 4.7e+02  Queries matched: 3
 hypothetical protein Ent638_2193 [Enterobacter sp. 638]
      gi|154173635    Mass: 8186     Score: 35     Expect: 1.5e+03  Queries matched: 3
 carbon storage regulator [Campylobacter curvus 525.92]

4.    gi|241889346    Mass: 27698    Score: 40     Expect: 5.3e+02  Queries matched: 4
 ABC-type transporter ATP-binding protein EcsA [Gemella haemolysans ATCC 10379]

5.    gi|62391945    Mass: 10602    Score: 38     Expect: 8.5e+02  Queries matched: 3
 hypothetical protein cg3430 [Corynebacterium glutamicum ATCC 13032]

6.    gi|229878859    Mass: 31057    Score: 37     Expect: 9.1e+02  Queries matched: 4
 5,10-methylenetetrahydrofolate reductase [Slackia heliotrinireducens DSM 20476]

7.    gi|194016645    Mass: 32587    Score: 37     Expect: 9.3e+02  Queries matched: 4
 transcriptional regulator [Bacillus pumilus ATCC 7061]

8.    gi|126699799    Mass: 57256    Score: 35     Expect: 1.5e+03  Queries matched: 6
 ATP-dependent RNA helicase [Clostridium difficile 630]
      gi|114773199    Mass: 8402     Score: 35     Expect: 1.7e+03  Queries matched: 3
 parA family protein [alpha proteobacterium HTCC2255]
      gi|26247165    Mass: 32013    Score: 35     Expect: 1.7e+03  Queries matched: 4
 hypothetical protein c1292 [Escherichia coli CFT073]

9.    gi|114767103    Mass: 7281     Score: 35     Expect: 1.6e+03  Queries matched: 3
 50S ribosomal protein L35 [Roseovarius sp. HTCC2601]

10.   gi|146340752    Mass: 10130    Score: 34     Expect: 1.9e+03  Queries matched: 3
 putative yohL-like protein [Bradyrhizobium sp. ORS278]

11.   gi|78044866    Mass: 4662     Score: 33     Expect: 2.7e+03  Queries matched: 3
 hypothetical protein CHY_1466 [Carboxydothermus hydrogenoformans Z-2901]

12.   gi|188582833    Mass: 38976    Score: 32     Expect: 2.9e+03  Queries matched: 4
 putative PAS/PAC sensor protein [Methylobacterium populi BJ001]

Search Parameters

Type of search         : Peptide Mass Fingerprint
Enzyme                 : Trypsin
Mass values            : Monoisotopic
Protein Mass           : Unrestricted
Peptide Mass Tolerance : ± 200 ppm
Peptide Charge State   : 1+
Max Missed Cleavages   : 1
Number of queries      : 37
Selected for scoring   : 20

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