Mascot Search Results

User            : 
Email           : jpuddick@waikato.ac.nz
Search title    : 
Database        : NCBInr 20090718 (9308017 sequences; 3189511245 residues)
Taxonomy        : Bacteria (Eubacteria) (4990342 sequences)
Timestamp       : 20 Jul 2009 at 03:32:41 GMT
Top Score       : 207 for gi|493908, Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase

Probability Based Mowse Score

Protein score is -10*Log(P), where P is the probability that the observed match is a random event.
Protein scores greater than 79 are significant (p<0.05).

Score Distribution

Concise Protein Summary Report

Help
  Significance threshold p< Max. number of hits

  

1.    gi|493908    Mass: 12361    Score: 207    Expect: 1e-14  Queries matched: 14
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|493905    Mass: 12361    Score: 207    Expect: 1e-14  Queries matched: 14
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|493911    Mass: 12361    Score: 207    Expect: 1e-14  Queries matched: 14
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|230301    Mass: 12375    Score: 164    Expect: 2e-10  Queries matched: 12
 Chain A, Crystal Structure Of A Barnase-D(GpC) Complex At 1.9 Angstroms Resolution
      gi|493893    Mass: 12375    Score: 164    Expect: 2e-10  Queries matched: 12
 Chain L, Subsite Binding In An Rnase: Structure Of A Barnase- Tetranucleotide Complex At 1.76 Angstroms Resolution
      gi|1065216    Mass: 12333    Score: 164    Expect: 2e-10  Queries matched: 12
 Chain A, Barnase Mutant With Ile 88 Replaced By Ala
      gi|4139700    Mass: 12374    Score: 164    Expect: 2e-10  Queries matched: 12
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|442651    Mass: 12359    Score: 164    Expect: 2e-10  Queries matched: 12
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|1065224    Mass: 12333    Score: 164    Expect: 2e-10  Queries matched: 12
 Chain A, Barnase Mutant With Ile 96 Replaced By Ala
      gi|188595921    Mass: 12318    Score: 147    Expect: 1e-08  Queries matched: 11
 Chain A, Crystal Structural Analysis Of Barnase-Barstar Complex
      gi|4139773    Mass: 12305    Score: 146    Expect: 1.3e-08  Queries matched: 11
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|4139770    Mass: 12306    Score: 146    Expect: 1.3e-08  Queries matched: 11
 Chain A, Deletion Of A Buried Salt-Bridge In Barnase
      gi|4139703    Mass: 12309    Score: 144    Expect: 2e-08  Queries matched: 11
 Chain A, Structural Response To Mutation At A Protein-Protein Interface
      gi|1065155    Mass: 12357    Score: 144    Expect: 2e-08  Queries matched: 11
 Chain A, Barnase S85cH102C DISULFIDE MUTANT
      gi|493899    Mass: 12361    Score: 143    Expect: 2.5e-08  Queries matched: 10
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|1065151    Mass: 12393    Score: 143    Expect: 2.5e-08  Queries matched: 11
 Chain A, Barnase T70cS92C DISULFIDE MUTANT
      gi|442654    Mass: 12359    Score: 123    Expect: 2.5e-06  Queries matched: 10
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|493902    Mass: 12361    Score: 123    Expect: 2.5e-06  Queries matched: 10
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|1065209    Mass: 12333    Score: 123    Expect: 2.5e-06  Queries matched: 10
 Chain A, Barnase Mutant With Ile 76 Replaced By Ala
      gi|576011    Mass: 12345    Score: 120    Expect: 5e-06  Queries matched: 10
 Chain A, Structural Studies Of Barnase Mutants
      gi|226887701    Mass: 12478    Score: 118    Expect: 7.9e-06  Queries matched: 10
 Chain A, A Conformationally Strained, Circular Permutant Of Barnase
      gi|1065202    Mass: 12333    Score: 118    Expect: 7.9e-06  Queries matched: 10
 Chain A, Barnase Mutant With Leu 14 Replaced By Ala
      gi|66360399    Mass: 12318    Score: 118    Expect: 7.9e-06  Queries matched: 10
 Chain A, Water-Mediate Interaction At Aprotein-Protein Interface
      gi|253722854    Mass: 12415    Score: 118    Expect: 7.9e-06  Queries matched: 10
 Chain A, Nmr Structure Of 15n-Labeled Barnase
      gi|576021    Mass: 12142    Score: 118    Expect: 7.9e-06  Queries matched: 10
 Chain A, Crystallographic Analysis Of Phe->leu Substitution In The Hydrophobic Core Of Barnase
      gi|99032161    Mass: 12176    Score: 118    Expect: 7.9e-06  Queries matched: 10
 Chain A, Barnase Cross-Linked With Glutaraldehyde
      gi|133149    Mass: 17462    Score: 107    Expect: 0.0001  Queries matched: 10
 RecName: Full=Ribonuclease; AltName: Full=Barnase; AltName: Full=RNase Ba; Flags: Precursor
      gi|551694    Mass: 16588    Score: 106    Expect: 0.00013  Queries matched: 10
 barnase (RNase) precursor [Bacillus amyloliquefaciens]
      gi|1065148    Mass: 12423    Score: 104    Expect: 0.0002  Queries matched: 8
 Chain A, Barnase A43cS80C DISULFIDE MUTANT
      gi|4139683    Mass: 12318    Score: 104    Expect: 0.0002  Queries matched: 8
 Chain A, Structural Response To Mutation At A Protein-Protein Interface
      gi|154687594    Mass: 16654    Score: 89     Expect: 0.0064  Queries matched: 9
 ribonuclease precursor (Barnase) [Bacillus amyloliquefaciens FZB42]
      gi|56421886    Mass: 3436     Score: 51     Expect: 36  Queries matched: 3
 hypothetical protein GK3351 [Geobacillus kaustophilus HTA426]


2.    gi|464661    Mass: 12374    Score: 97     Expect: 0.00095  Queries matched: 10
 RecName: Full=Ribonuclease; AltName: Full=RNase Bci

3.    gi|239624765    Mass: 29985    Score: 65     Expect: 1.4  Queries matched: 6
 transcriptional regulator [Clostridiales bacterium 1_7_47_FAA]

4.    gi|239917985    Mass: 29823    Score: 61     Expect: 4.2  Queries matched: 7
 phage shock protein A, PspA [Micrococcus luteus NCTC 2665]

5.    gi|225573354    Mass: 19259    Score: 60     Expect: 5.2  Queries matched: 5
 hypothetical protein RUMHYD_01546 [Blautia hydrogenotrophica DSM 10507]

6.    gi|149374623    Mass: 49879    Score: 59     Expect: 6.9  Queries matched: 6
 NADH-quinone oxidoreductase, F subunit [Marinobacter algicola DG893]
      gi|54025027    Mass: 36653    Score: 53     Expect: 26  Queries matched: 5
 putative phenol hydroxylase [Nocardia farcinica IFM 10152]

7.    gi|117929124    Mass: 27282    Score: 57     Expect: 9.3  Queries matched: 5
 polysaccharide deacetylase [Acidothermus cellulolyticus 11B]

8.    gi|83952675    Mass: 28012    Score: 54     Expect: 20  Queries matched: 5
 transcriptional regulator, DeoR family protein [Roseovarius nubinhibens ISM]

9.    gi|187927470    Mass: 14272    Score: 54     Expect: 21  Queries matched: 5
 ribosomal protein S9 [Ralstonia pickettii 12J]

10.   gi|87198490    Mass: 45630    Score: 52     Expect: 29  Queries matched: 6
 hypothetical protein Saro_0465 [Novosphingobium aromaticivorans DSM 12444]

11.   gi|218133525    Mass: 38846    Score: 52     Expect: 30  Queries matched: 7
 hypothetical protein BACPEC_01392 [Bacteroides pectinophilus ATCC 43243]

12.   gi|115522703    Mass: 18370    Score: 52     Expect: 34  Queries matched: 5
 MarR family transcriptional regulator [Rhodopseudomonas palustris BisA53]

13.   gi|229539629    Mass: 8992     Score: 51     Expect: 36  Queries matched: 4
 hypothetical protein PlimDRAFT_34940 [Planctomyces limnophilus DSM 3776]

14.   gi|163746172    Mass: 67435    Score: 51     Expect: 38  Queries matched: 9
 peptide/nickel/opine uptake family ABC transporter, ATP-binding protein, putative [Oceanibulbus indolifex HEL-45]

15.   gi|224394138    Mass: 15159    Score: 51     Expect: 42  Queries matched: 5
 Tat pathway signal sequence domain protein [Labrenzia alexandrii DFL-11]

16.   gi|83721576    Mass: 24979    Score: 50     Expect: 50  Queries matched: 5
 hypothetical protein BTH_I1344 [Burkholderia thailandensis E264]
      gi|167580734    Mass: 24993    Score: 50     Expect: 50  Queries matched: 5
 hypothetical protein BthaT_21443 [Burkholderia thailandensis TXDOH]

17.   gi|229591150    Mass: 35643    Score: 50     Expect: 53  Queries matched: 5
 putative AraC-family transcriptional regulator [Pseudomonas fluorescens SBW25]

Search Parameters

Type of search         : Peptide Mass Fingerprint
Enzyme                 : Trypsin
Mass values            : Monoisotopic
Protein Mass           : Unrestricted
Peptide Mass Tolerance : ± 200 ppm
Peptide Charge State   : 1+
Max Missed Cleavages   : 1
Number of queries      : 52
Selected for scoring   : 22

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