Mascot Search Results

User            : 
Email           : jpuddick@waikato.ac.nz
Search title    : 
Database        : NCBInr 20090718 (9308017 sequences; 3189511245 residues)
Taxonomy        : Bacteria (Eubacteria) (4990342 sequences)
Timestamp       : 20 Jul 2009 at 03:26:17 GMT
Top Score       : 140 for gi|493899, Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase

Probability Based Mowse Score

Protein score is -10*Log(P), where P is the probability that the observed match is a random event.
Protein scores greater than 79 are significant (p<0.05).

Score Distribution

Concise Protein Summary Report

Help
  Significance threshold p< Max. number of hits

  

1.    gi|493899    Mass: 12361    Score: 140    Expect: 5e-08  Queries matched: 10
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|4139770    Mass: 12306    Score: 121    Expect: 4e-06  Queries matched: 9
 Chain A, Deletion Of A Buried Salt-Bridge In Barnase
      gi|230301    Mass: 12375    Score: 118    Expect: 7.9e-06  Queries matched: 9
 Chain A, Crystal Structure Of A Barnase-D(GpC) Complex At 1.9 Angstroms Resolution
      gi|493893    Mass: 12375    Score: 118    Expect: 7.9e-06  Queries matched: 9
 Chain L, Subsite Binding In An Rnase: Structure Of A Barnase- Tetranucleotide Complex At 1.76 Angstroms Resolution
      gi|4139773    Mass: 12305    Score: 100    Expect: 0.00052  Queries matched: 8
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|4139703    Mass: 12309    Score: 98     Expect: 0.00076  Queries matched: 8
 Chain A, Structural Response To Mutation At A Protein-Protein Interface
      gi|1065155    Mass: 12357    Score: 98     Expect: 0.00076  Queries matched: 8
 Chain A, Barnase S85cH102C DISULFIDE MUTANT
      gi|493908    Mass: 12361    Score: 98     Expect: 0.00076  Queries matched: 8
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|1065216    Mass: 12333    Score: 98     Expect: 0.00076  Queries matched: 8
 Chain A, Barnase Mutant With Ile 88 Replaced By Ala
      gi|4139700    Mass: 12374    Score: 98     Expect: 0.00076  Queries matched: 8
 Chain A, Deletion Of A Buried Salt Bridge In Barnase
      gi|493905    Mass: 12361    Score: 98     Expect: 0.00076  Queries matched: 8
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|442651    Mass: 12359    Score: 98     Expect: 0.00076  Queries matched: 8
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|1065224    Mass: 12333    Score: 98     Expect: 0.00076  Queries matched: 8
 Chain A, Barnase Mutant With Ile 96 Replaced By Ala
      gi|1065151    Mass: 12393    Score: 98     Expect: 0.00076  Queries matched: 8
 Chain A, Barnase T70cS92C DISULFIDE MUTANT
      gi|493911    Mass: 12361    Score: 98     Expect: 0.00076  Queries matched: 8
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|442654    Mass: 12359    Score: 98     Expect: 0.00081  Queries matched: 8
 Chain A, The Contribution Of Buried Hydrogen Bonds To Protein Stability: The Crystal Structures Of Two Barnase Mutants
      gi|493902    Mass: 12361    Score: 98     Expect: 0.00081  Queries matched: 8
 Chain A, Crystal Structural Analysis Of Mutations In The Hydrophobic Cores Of Barnase
      gi|1065209    Mass: 12333    Score: 98     Expect: 0.00081  Queries matched: 8
 Chain A, Barnase Mutant With Ile 76 Replaced By Ala
      gi|1065148    Mass: 12423    Score: 98     Expect: 0.00081  Queries matched: 7
 Chain A, Barnase A43cS80C DISULFIDE MUTANT
      gi|188595921    Mass: 12318    Score: 80     Expect: 0.048  Queries matched: 7
 Chain A, Crystal Structural Analysis Of Barnase-Barstar Complex
      gi|576011    Mass: 12345    Score: 75     Expect: 0.15  Queries matched: 7
 Chain A, Structural Studies Of Barnase Mutants
      gi|226887701    Mass: 12478    Score: 73     Expect: 0.24  Queries matched: 7
 Chain A, A Conformationally Strained, Circular Permutant Of Barnase
      gi|1065202    Mass: 12333    Score: 73     Expect: 0.24  Queries matched: 7
 Chain A, Barnase Mutant With Leu 14 Replaced By Ala
      gi|66360399    Mass: 12318    Score: 73     Expect: 0.24  Queries matched: 7
 Chain A, Water-Mediate Interaction At Aprotein-Protein Interface
      gi|253722854    Mass: 12415    Score: 73     Expect: 0.24  Queries matched: 7
 Chain A, Nmr Structure Of 15n-Labeled Barnase
      gi|576021    Mass: 12142    Score: 73     Expect: 0.24  Queries matched: 7
 Chain A, Crystallographic Analysis Of Phe->leu Substitution In The Hydrophobic Core Of Barnase
      gi|99032161    Mass: 12176    Score: 73     Expect: 0.24  Queries matched: 7
 Chain A, Barnase Cross-Linked With Glutaraldehyde
      gi|464661    Mass: 12374    Score: 71     Expect: 0.37  Queries matched: 7
 RecName: Full=Ribonuclease; AltName: Full=RNase Bci
      gi|551694    Mass: 16588    Score: 66     Expect: 1.3  Queries matched: 7
 barnase (RNase) precursor [Bacillus amyloliquefaciens]
      gi|133149    Mass: 17462    Score: 66     Expect: 1.4  Queries matched: 7
 RecName: Full=Ribonuclease; AltName: Full=Barnase; AltName: Full=RNase Ba; Flags: Precursor
      gi|154687594    Mass: 16654    Score: 65     Expect: 1.5  Queries matched: 7
 ribonuclease precursor (Barnase) [Bacillus amyloliquefaciens FZB42]
      gi|4139683    Mass: 12318    Score: 58     Expect: 8.1  Queries matched: 6
 Chain A, Structural Response To Mutation At A Protein-Protein Interface
      gi|22536744    Mass: 15617    Score: 56     Expect: 13  Queries matched: 4
 prophage LambdaSa1, single-strand binding protein [Streptococcus agalactiae 2603V/R]


2.    gi|188533968    Mass: 27819    Score: 64     Expect: 2.2  Queries matched: 5
 Conserved hypothetical protein YdiV [Erwinia tasmaniensis Et1/99]
      gi|229875870    Mass: 14711    Score: 52     Expect: 32  Queries matched: 4
 molybdenum-binding protein [Sphaerobacter thermophilus DSM 20745]
      gi|163735762    Mass: 4736     Score: 51     Expect: 42  Queries matched: 3
 hypothetical protein RLO149_22550 [Roseobacter litoralis Och 149]

3.    gi|217034427    Mass: 34484    Score: 61     Expect: 4.3  Queries matched: 6
 hypothetical protein HP9810_11g9 [Helicobacter pylori 98-10]

4.    gi|239618472    Mass: 30001    Score: 58     Expect: 7.9  Queries matched: 7
 Methylenetetrahydrofolate dehydrogenase (NADP(+)) [Kosmotoga olearia TBF 19.5.1]

5.    gi|158520306    Mass: 10808    Score: 57     Expect: 9.3  Queries matched: 4
 hypothetical protein Dole_0289 [Desulfococcus oleovorans Hxd3]
      gi|153872887    Mass: 11551    Score: 50     Expect: 50  Queries matched: 4
 reverse transcriptase [Beggiatoa sp. PS]

6.    gi|227364521    Mass: 10238    Score: 55     Expect: 17  Queries matched: 4
 conserved hypothetical protein [Lactobacillus reuteri MM2-3]
      gi|148544097    Mass: 10569    Score: 55     Expect: 17  Queries matched: 4
 hypothetical protein Lreu_0867 [Lactobacillus reuteri DSM 20016]

7.    gi|229829893    Mass: 15178    Score: 54     Expect: 19  Queries matched: 4
 hypothetical protein GCWU000342_01999 [Shuttleworthia satelles DSM 14600]

8.    gi|195938710    Mass: 24819    Score: 52     Expect: 29  Queries matched: 5
 putativa replication protein [Escherichia coli O157:H7 str. EC4024]

9.    gi|114766596    Mass: 18533    Score: 51     Expect: 40  Queries matched: 4
 3-hydroxydecanoyl-ACP dehydratase [Roseovarius sp. HTCC2601]

10.   gi|188583003    Mass: 12568    Score: 51     Expect: 41  Queries matched: 4
 conserved hypothetical protein [Methylobacterium populi BJ001]

11.   gi|195977488    Mass: 17755    Score: 51     Expect: 42  Queries matched: 4
 single-stranded DNA-binding protein [Streptococcus equi subsp. zooepidemicus MGCS10565]
      gi|225869850    Mass: 17740    Score: 51     Expect: 42  Queries matched: 4
 single strand binding protein (SSB) [Streptococcus equi subsp. equi 4047]
      gi|225869196    Mass: 17802    Score: 51     Expect: 42  Queries matched: 4
 single strand binding protein (SSB) [Streptococcus equi subsp. zooepidemicus]

12.   gi|212706391    Mass: 24268    Score: 50     Expect: 44  Queries matched: 4
 hypothetical protein PROVRUST_01310 [Providencia rustigianii DSM 4541]

Search Parameters

Type of search         : Peptide Mass Fingerprint
Enzyme                 : Trypsin
Mass values            : Monoisotopic
Protein Mass           : Unrestricted
Peptide Mass Tolerance : ± 200 ppm
Peptide Charge State   : 1+
Max Missed Cleavages   : 1
Number of queries      : 45
Selected for scoring   : 15

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